Student Annotation Project/Genes Freiburg SS2010

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Annotated Genes

Original gene nameProductGenBank entryAnnotatorCGIs
4CL14-coumarate:coenzyme A ligase 1EU167552Christian VolkPp1s185_64V2.1
4CL24-coumarate:coenzyme A ligase 2EU167553Christian VolkPp1s20_336V2.1
4CL34-coumarate:coenzyme A ligase 3EU167554Christian VolkPp1s71_164V2.1
4CL44-coumarate:coenzyme A ligase 4EU167555Christian VolkPp1s167_89V2.1
Act1actin 1AY382282Christian VolkPp1s337_20V2.1
Act3actin 3AY382283Christian VolkPp1s381_18V2.1
Act5actin 5AY382284Christian VolkPp1s198_150V2.1
Act7actin 7AY382285Christian VolkPp1s198_147V2.1
Nar2;1putative component of high affinity nitrate transporterAB231681Claudia BachmannPp1s132_47V5.1
Nar2;2putative component of high affinity nitrate transporterAB231682Claudia BachmannPp1s17_203V5.1
Nar2;3putative component of high affinity nitrate transporterAB231683Claudia BachmannPp1s100_222V5.1
NRT2;1nitrate transporterAB231676Claudia BachmannPp1s100_213V5.1
NRT2;2nitrate transporterAB231677Claudia BachmannPp1s100_219V5.1
NRT2;3nitrate transporterAB231678Claudia BachmannPp1s75_71V5.1
NRT2;4nitrate transporterAB231679Claudia BachmannPp1s449_21V5.1
NRT2;5nitrate transporterAB231680Claudia BachmannPp1s12_57V5.1
coxIIIcytochrome-c oxidase subunit IIIX53679Joke LambrechtBAE93096.1
DELLAaDELLA proteinEF646472Joke LambrechtPp1s175_15V5.1
DELLAbDELLA proteinEF646473Joke LambrechtPp1s12_239V5.1
des6delta6-acyl-lipid desaturaseAJ222981Joke LambrechtPp1s64_152V5.1
ena1Na P-type ATPaseEF683141Joke LambrechtPp1s40_224V5.1
ena2putative Na P-type ATPaseAJ564261Joke LambrechtPp1s268_7V5.2
ena2putative Na P-type ATPaseAJ564260Joke LambrechtPp1s268_7V5.1
ena2putative Na P-type ATPaseAJ564259Joke LambrechtPp1s268_7V5.3
ExpA5alpha expansin PpExpA5AY131155Joke LambrechtPp1s33_246V5.1
ExpA6alpha expansin PpExpA6AY131156Joke LambrechtPp1s325_10V5.1
ARFauxin response factorBK006051Nico van GesselPp1s279_8V5.1
arp3actin-related protein ARP3AM287016Nico van GesselPp1s85_160V5.1
ARPC4actin-related protein complex 4DQ438971Nico van GesselPp1s204_63V5.1
atp1ATPase alpha subunitDQ646186Nico van GesselBAE93100.1
atpBATPase beta subunitDQ646069Nico van GesselPp1s154_60V5.1
brk1BRICK1/HSPC300DQ522238Nico van GesselPp1s35_151V5.1
C3HDZ1class III homeodomain-leucine zipperDQ385533Nico van GesselPp1s15_8V5.1
C3HDZ2class III homeodomain-leucine zipperDQ385534Nico van GesselPp1s67_104V5.1
col-2CONSTANS-like 2AJ890107Nico van GesselPp1s97_102V5.1
col-3CONSTANS-like 3AJ890108Nico van GesselPp1s364_5V5.1
col1CONSTANS-like 1AJ890106Nico van GesselPp1s371_24V5.1
Pphb7homeobox protein Pphb7 short formAB084623Nisha RajasundaramPp1s7_260V5.1;Pp1s7_260V5.2;Pp1s7_260V5.3;Pp1s7_260V5.4
PpLFY1FLORICAULA/LEAFY homolog 1AB192348Nisha RajasundaramPp1s52_67V5.1
PpLFY2FLORICAULA/LEAFY homolog 2AB192349Nisha RajasundaramPp1s74_226V5.1
PpMinD1plastid division site determinant MinDAB125336Nisha RajasundaramPp1s30_279V5.1
PpMinE1plastid division site determinant MinEAB195263Nisha RajasundaramPp1s9_40V5.1;Pp1s9_40V5.2;Pp1s9_40V5.3
PpPPR_20pentatricopeptide repeat proteinAB276020Nisha RajasundaramPp1s322_17V5.1
PpPPR_38pentatricopeptide repeat proteinAB267806Nisha RajasundaramPp1s279_11V5.1;Pp1s279_11V5.2
PPRpentatricopeptide repeat-like proteinEF607999Nisha RajasundaramPp1s68_206V5.1
PpRpoA2DNA-directed RNA polymerase alpha chainAB293563Nisha RajasundaramPp1s80_146V5.1
NTMC2Type1.1NTMC2Type1.1 proteinAM410046Paul StaabPp1s16_202V5.1
NTMC2Type1.2NTMC2Type1.2 proteinAM410049Paul StaabPp1s9_374V5.1
NTMC2Type3.1NTMC2Type3.1 proteinAM410050Paul StaabPp1s359_10V5.1
PBPpenicillin-binding proteinAB196489Paul StaabPp1s138_42V5.1
pca1calcium-dependent ATPaseAJ544769Paul StaabPp1s8_295V2.1
phy1phytochromeAY123146Paul StaabPp1s233_24V5.1
phy2phytochromeAY123147Paul StaabPp1s327_28V5.1
phy3phytochromeAY123148Paul StaabPp1s81_153V5.1
phy4phytochromeAY123145Paul StaabPp1s164_64V5.1
PIP2;1plasma membrane aquaporinAY494191Stefanie RöschPp1s8_156V5.1
PIP2;2plasma membrane aquaporinAY494192Stefanie RöschPp1s55_305V5.1
PIP2;3plasma membrane aquaporinDQ018113Stefanie RöschPp1s267_60V5.1
PpG1L1G1-like proteinAB512484Stefanie RöschPp1s10_71V5.3
PpGLP1bgermin-like proteinAB177646Stefanie RöschPp1s82_3V5.3;Pp1s82_3V5.1
PpGLP2germin-like proteinAB185322Stefanie RöschPp1s206_123V5.1
PpGLP3bgermin-like proteinAB177645Stefanie RöschPp1s68_19V5.1
PpGLP4germin-like proteinAB185323Stefanie RöschPp1s156_54V5.2
PpGLP5germin-like proteinAB185324Stefanie RöschPp1s97_55V5.2
PpGLP6germin-like proteinAB185492Stefanie RöschPp1s338_55V5.1
PpGLP7germin-like proteinAB185325Stefanie RöschPp1s97_53V5.1
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